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  5. Pp1s191_27V6

Pp1s191_27V6


Description : alpha expansin xpa5


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s191_27V6
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
419575 No alias expansin A16 0.02 Orthogroups_2024-Update
Bradi1g61190 No alias expansin A15 0.02 Orthogroups_2024-Update
Brara.K01453.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Glyma.13G336600 No alias expansin A4 0.03 Orthogroups_2024-Update
HORVU1Hr1G069830.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
LOC_Os06g01920 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000910-RA No alias (at5g05290 : 323.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
Pp1s251_70V6 No alias alpha-expansin 15 0.03 Orthogroups_2024-Update
Solyc09g010860 No alias expansin precursor 4 0.03 Orthogroups_2024-Update
Sopen10g035900 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 159 237
IPR009009 RlpA-like_DPBB 64 147
No external refs found!