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  5. Pp1s191_77V6

Pp1s191_77V6


Description : cop9 constitutive photomorphogenic homolog subunit 5


Gene families : OG_42_0004402 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s191_77V6
Cluster HCCA clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Cre09.g399178 No alias COP9 signalosome 5A 0.02 Orthogroups_2024-Update
Kfl00105_0100 kfl00105_0100_v1.... (at1g71230 : 513.0) Encodes a subunit of the COP9... 0.03 Orthogroups_2024-Update
evm.model.tig00021435.18 No alias (at1g71230 : 306.0) Encodes a subunit of the COP9... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 60 171
No external refs found!