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Pp1s194_180V6


Description : zinc finger


Gene families : OG_42_0008397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s194_180V6

Target Alias Description ECC score Gene Family Method Actions
At1g61690 No alias At1g61690 [Source:UniProtKB/TrEMBL;Acc:Q6NPS1] 0.04 Orthogroups_2024-Update
LOC_Os03g46710 No alias expressed protein 0.02 Orthogroups_2024-Update
Sopen02g024620 No alias NPH3 family 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 18 76
No external refs found!