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  5. Pp1s196_30V6

Pp1s196_30V6


Description : expansin 2


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s196_30V6
Cluster HCCA clusters: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
A4A49_26789 No alias expansin-a3 0.02 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.02 Orthogroups_2024-Update
A4A49_61517 No alias expansin-a23 0.02 Orthogroups_2024-Update
Bradi3g09950 No alias expansin 11 0.02 Orthogroups_2024-Update
Bradi3g09960 No alias expansin 11 0.02 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.03 Orthogroups_2024-Update
Brara.D00393.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.G02887.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.I01201.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.02 Orthogroups_2024-Update
Glyma.14G068000 No alias expansin A4 0.02 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.03 Orthogroups_2024-Update
LOC_Os03g60720 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g19570 No alias expansin precursor, putative, expressed 0.01 Orthogroups_2024-Update
MA_103404g0010 No alias (at3g55500 : 343.0) expansin-like protein. Naming... 0.02 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00051817-RA No alias (at1g20190 : 379.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00055878-RA No alias (at5g02260 : 159.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.001G401700 No alias expansin 12 0.02 Orthogroups_2024-Update
Potri.016G098700 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G032400.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.004G121900.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Solyc08g080060 No alias Expansin-like protein (AHRD V3.3 *** Q0WT83_ARATH) 0.02 Orthogroups_2024-Update
Sopen06g017810 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.03 Orthogroups_2024-Update
Sopen09g005600 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 130 205
IPR009009 RlpA-like_DPBB 46 122
No external refs found!