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  5. Pp1s196_87V6

Pp1s196_87V6


Description : f-box family protein


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s196_87V6
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
A4A49_03444 No alias coronatine-insensitive protein 1 0.03 Orthogroups_2024-Update
Brara.B03253.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
Brara.C02522.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
Brara.C02768.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
GRMZM2G427529 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G227300 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os02g52230 No alias coronatine-insensitive protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g31620 No alias OsFBL55 - F-box domain and LRR containing protein, expressed 0.02 Orthogroups_2024-Update
MA_15842g0010 No alias (at3g62980 : 510.0) Encodes an auxin receptor that... 0.03 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
Pp1s211_131V6 No alias TLP2B TIR1-like auxin receptor protein 0.03 Orthogroups_2024-Update
Seita.9G457300.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 150 165
No external refs found!