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  5. Pp1s19_105V6

Pp1s19_105V6


Description : endo-beta- -glucanase


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s19_105V6
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
99802 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
A4A49_05097 No alias endoglucanase 11 0.02 Orthogroups_2024-Update
At1g19940 No alias Endoglucanase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI9] 0.03 Orthogroups_2024-Update
At3g43860 No alias Endoglucanase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG3] 0.05 Orthogroups_2024-Update
Bradi2g11870 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
Bradi2g32270 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.02 Orthogroups_2024-Update
Bradi4g35970 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
Brara.E01714.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.G03367.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
GRMZM2G154678 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Glyma.06G025100 No alias glycosyl hydrolase 9B7 0.02 Orthogroups_2024-Update
Glyma.06G277200 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
HORVU2Hr1G120100.1 No alias class-C endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
MA_16152g0010 No alias (at4g02290 : 718.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
MA_216572g0010 No alias (at1g02800 : 571.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
MA_42717g0010 No alias (at4g11050 : 801.0) glycosyl hydrolase 9C3 (GH9C3);... 0.02 Orthogroups_2024-Update
PSME_00016234-RA No alias (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... 0.02 Orthogroups_2024-Update
PSME_00036164-RA No alias (at1g48930 : 712.0) glycosyl hydrolase 9C1 (GH9C1);... 0.02 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G273500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G276600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G119300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G029800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g014220 No alias Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 31 486
No external refs found!