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  5. Pp1s1_792V6

Pp1s1_792V6


Description : multidrug pheromone mdr abc transporter family


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s1_792V6
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
230688 No alias ATP binding cassette subfamily B19 0.01 Orthogroups_2024-Update
At3g55320 No alias ABC transporter B family member 20... 0.02 Orthogroups_2024-Update
Bradi2g17710 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
HORVU3Hr1G065320.10 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00006521-RA No alias (at3g28345 : 1427.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
PSME_00039347-RA No alias (at1g02520 : 802.0) P-glycoprotein 11 (PGP11); FUNCTIONS... 0.05 Orthogroups_2024-Update
Solyc02g071340 No alias ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1149 1297
IPR011527 ABC1_TM_dom 815 1080
IPR011527 ABC1_TM_dom 94 309
IPR003439 ABC_transporter-like 381 529
No external refs found!