1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s1_798V6

Pp1s1_798V6


Description : contains ESTs AU057966(S21949),(R10946) unknown protein [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s1_798V6
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
At2g41090 No alias Calmodulin-like protein 10... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 19 78
IPR002048 EF_hand_dom 100 164
No external refs found!