Pp1s204_120V6

Description : MKP6.28; cyclic nucleotide-binding transporter 1 / CNBT1 (CNGC20) [KO:K05391] [Arabidopsis thaliana]

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s204_120V6
Cluster	HCCA clusters: Cluster_198

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19266	No alias	putative cyclic nucleotide-gated ion channel 8	0.02	Orthogroups_2024-Update
At1g01340	No alias	Probable cyclic nucleotide-gated ion channel 10...	0.04	Orthogroups_2024-Update
At2g46440	No alias	Cyclic nucleotide-gated ion channel 11...	0.03	Orthogroups_2024-Update
At3g17700	No alias	Probable cyclic nucleotide-gated ion channel 20,...	0.02	Orthogroups_2024-Update
Brara.J01954.1	No alias	temperature sensor protein *(CNGC2) & cyclic...	0.03	Orthogroups_2024-Update
GRMZM2G078781	No alias	cyclic nucleotide-gated cation channel 4	0.02	Orthogroups_2024-Update
Kfl00044_0210	kfl00044_0210_v1.1	(at2g28260 : 392.0) member of Cyclic nucleotide gated...	0.03	Orthogroups_2024-Update
PSME_00046136-RA	No alias	(at1g15990 : 435.0) member of Cyclic nucleotide gated...	0.02	Orthogroups_2024-Update
Potri.017G067000	No alias	cyclic nucleotide-gated channel 16	0.02	Orthogroups_2024-Update
Pp1s189_85V6	No alias	cyclic nucleotide-gated ion	0.02	Orthogroups_2024-Update
Seita.8G054900.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Sobic.004G325400.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Solyc12g010010	No alias	Cyclic nucleotide-gated ion channel, putative (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen02g033280	No alias	Cyclic nucleotide-binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	131	458

External Links

No external refs found!

Pp1s204_120V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation