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  5. Pp1s204_138V6

Pp1s204_138V6


Description : dna binding


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s204_138V6
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G231300 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Seita.1G373400.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G289900.2 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Solyc08g079630 No alias AT hook, DNA-binding motif-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 194 309
No external refs found!