1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s205_47V6

Pp1s205_47V6


Description : polyubiquitin-like protein


Gene families : OG_42_0001767 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001767_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s205_47V6
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G265600 No alias ubiquitin protein ligase 5 0.02 Orthogroups_2024-Update
Glyma.17G008400 No alias ubiquitin protein ligase 5 0.02 Orthogroups_2024-Update
MA_15599g0010 No alias (at4g12570 : 512.0) Knock-out mutants showed accelerated... 0.05 Orthogroups_2024-Update
Mp1g07640.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Orthogroups_2024-Update
PSME_00047296-RA No alias (at4g12570 : 414.0) Knock-out mutants showed accelerated... 0.02 Orthogroups_2024-Update
Potri.016G059800 No alias ubiquitin protein ligase 5 0.02 Orthogroups_2024-Update
Pp1s148_98V6 No alias polyubiquitin-like protein 0.02 Orthogroups_2024-Update
Seita.2G250600.1 No alias E3 ubiquitin ligase *(UPL5) 0.02 Orthogroups_2024-Update
Seita.6G202900.1 No alias E3 ubiquitin ligase *(UPL5) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006559 L-phenylalanine catabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 889 1188
IPR000626 Ubiquitin_dom 365 434
No external refs found!