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  5. Pp1s206_97V6

Pp1s206_97V6


Description : s-adenosylmethionine decarboxylase


Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s206_97V6
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
At3g25570 No alias S-adenosylmethionine decarboxylase proenzyme 3... 0.02 Orthogroups_2024-Update
GRMZM2G125635 No alias Adenosylmethionine decarboxylase family protein 0.01 Orthogroups_2024-Update
GRMZM2G154397 No alias Adenosylmethionine decarboxylase family protein 0.01 Orthogroups_2024-Update
Solyc01g010050 No alias S-adenosylmethionine decarboxylase proenzyme (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA InterProScan predictions
BP GO:0006597 spermine biosynthetic process IEA InterProScan predictions
BP GO:0008295 spermidine biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 22 363
No external refs found!