Pp1s209_130V6

Description : mads-box transcription factor

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s209_130V6
Cluster	HCCA clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07845	No alias	agamous-like mads-box protein agl8	0.05	Orthogroups_2024-Update
A4A49_11564	No alias	developmental protein sepallata 1	0.01	Orthogroups_2024-Update
A4A49_15806	No alias	developmental protein sepallata 1	0.02	Orthogroups_2024-Update
At1g24260	No alias	At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9]	0.02	Orthogroups_2024-Update
At1g65360	No alias	Agamous-like MADS-box protein AGL23...	0.02	Orthogroups_2024-Update
At1g77950	No alias	AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]	0.02	Orthogroups_2024-Update
At1g77980	No alias	Agamous-like MADS-box protein AGL66...	0.02	Orthogroups_2024-Update
At2g22630	No alias	AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]	0.03	Orthogroups_2024-Update
At4g09960	No alias	K-box region and MADS-box transcription factor family...	0.02	Orthogroups_2024-Update
At4g22950	No alias	Agamous-like MADS-box protein AGL19...	0.02	Orthogroups_2024-Update
At5g15800	No alias	K-box region and MADS-box transcription factor family...	0.02	Orthogroups_2024-Update
At5g60910	No alias	Agamous-like MADS-box protein AGL8...	0.02	Orthogroups_2024-Update
Bradi1g39927	No alias	AGAMOUS-like 23	0.01	Orthogroups_2024-Update
Bradi2g38695	No alias	MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Bradi3g41297	No alias	AGAMOUS-like 14	0.01	Orthogroups_2024-Update
Bradi3g51800	No alias	AGAMOUS-like 6	0.02	Orthogroups_2024-Update
Bradi4g34680	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Bradi5g21700	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Brara.B01837.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.02	Orthogroups_2024-Update
Brara.C00582.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C04645.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Brara.D02091.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00519.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Brara.F03360.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.G01735.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01578.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02486.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Brara.I03027.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.K00360.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G003514	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
GRMZM2G018589	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
GRMZM2G159397	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G171365	No alias	AGAMOUS-like 20	0.01	Orthogroups_2024-Update
Glyma.01G064100	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.03G019300	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Glyma.05G050700	No alias	AGAMOUS-like 19	0.02	Orthogroups_2024-Update
Glyma.05G163200	No alias	K-box region and MADS-box transcription factor family protein	0.08	Orthogroups_2024-Update
Glyma.06G117600	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.07G081300	No alias	AGAMOUS-like 6	0.02	Orthogroups_2024-Update
Glyma.10G085100	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.13G255200	No alias	AGAMOUS-like 21	0.02	Orthogroups_2024-Update
Glyma.14G183800	No alias	AGAMOUS-like 16	0.01	Orthogroups_2024-Update
Glyma.17G081200	No alias	AGAMOUS-like 8	0.02	Orthogroups_2024-Update
Glyma.20G136700	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
HORVU3Hr1G095090.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os01g10504	No alias	OsMADS3 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g06860	No alias	OsMADS80 - MADS-box family gene with M-alpha type-box, expressed	0.01	Orthogroups_2024-Update
LOC_Os02g07430	No alias	OsMADS29 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g36924	No alias	OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	0.01	Orthogroups_2024-Update
LOC_Os03g03070	No alias	transcription factor, putative, expressed	0.01	Orthogroups_2024-Update
LOC_Os03g54170	No alias	OsMADS34 - MADS-box family gene with MIKCc type-box, expressed	0.01	Orthogroups_2024-Update
LOC_Os04g23910	No alias	OsMADS25 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g34940	No alias	OsMADS4 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g41950	No alias	OsMADS7 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g39130	No alias	OsMADS56 - MADS-box family gene with MIKCc type-box, expressed	0.01	Orthogroups_2024-Update
LOC_Os12g31748	No alias	OsMADS20 - MADS-box family gene with MIKCc type-box, expressed	0.01	Orthogroups_2024-Update
MA_333471g0010	No alias	(at2g45660 : 106.0) Controls flowering and is required...	0.03	Orthogroups_2024-Update
PSME_00013164-RA	No alias	(at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all...	0.03	Orthogroups_2024-Update
Potri.001G058400	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.001G284301	No alias	AGAMOUS-like 21	0.02	Orthogroups_2024-Update
Potri.003G119700	No alias	AGAMOUS-like 19	0.02	Orthogroups_2024-Update
Potri.004G130900	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
Potri.004G131100	No alias	AGAMOUS-like 29	0.02	Orthogroups_2024-Update
Potri.007G087500	No alias	AGAMOUS-like 66	0.02	Orthogroups_2024-Update
Potri.009G084200	No alias	AGAMOUS-like 62	0.01	Orthogroups_2024-Update
Potri.017G039800	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Pp1s55_280V6	No alias	mikc* mads-box transcription factor	0.03	Orthogroups_2024-Update
Pp1s68_293V6	No alias	mads box	0.03	Orthogroups_2024-Update
Pp1s88_174V6	No alias	mads box	0.03	Orthogroups_2024-Update
Seita.2G002300.1	No alias	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.06	Orthogroups_2024-Update
Seita.3G280400.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Seita.6G156800.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Seita.6G194800.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Seita.9G561000.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G314400.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
Sobic.003G027000.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
Solyc02g071730	No alias	Tomato AGAMOUS 1	0.03	Orthogroups_2024-Update
Solyc04g078300	No alias	MADS-box transcription factor family protein (AHRD V3.3...	0.02	Orthogroups_2024-Update
Solyc06g035570	No alias	No description available	0.02	Orthogroups_2024-Update
Solyc10g017630	No alias	MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ)	0.05	Orthogroups_2024-Update
Sopen01g045900	No alias	SRF-type transcription factor (DNA-binding and...	0.02	Orthogroups_2024-Update
Sopen02g033990	No alias	SRF-type transcription factor (DNA-binding and...	0.01	Orthogroups_2024-Update
Sopen06g023350	No alias	K-box region	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
BP	GO:0006528	asparagine metabolic process	IEP	Predicted GO
BP	GO:0006529	asparagine biosynthetic process	IEP	Predicted GO
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	144	229
IPR002100	TF_MADSbox	72	119

External Links

No external refs found!

Pp1s209_130V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation