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  5. Solyc11g039520

Solyc11g039520


No description available


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g039520
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g29700 No alias retrotransposon, putative, centromere-specific, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g06110 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc09g015540 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g036870 No alias Retroviral aspartyl protease 0.05 Orthogroups_2024-Update
Sopen05g016260 No alias Retroviral aspartyl protease 0.02 Orthogroups_2024-Update
Sopen05g023460 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen06g009810 No alias Retroviral aspartyl protease 0.02 Orthogroups_2024-Update
Sopen08g011500 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen09g009210 No alias Retrotransposon gag protein 0.04 Orthogroups_2024-Update
Sopen10g020660 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!