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Description : zinc finger
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s213_71V6 | |
| Cluster | HCCA clusters: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g35330 | No alias | RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] | 0.02 | Orthogroups_2024-Update | |
| At2g17450 | No alias | Probable E3 ubiquitin-protein ligase ATL44... | 0.03 | Orthogroups_2024-Update | |
| Bradi5g18837 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A03822.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G386584 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G401997 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G222300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G046400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.20G099800 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU5Hr1G103740.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g11520 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g35329 | No alias | RING-H2 finger protein ATL3F, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g34650 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Potri.007G111900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.008G219200 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
| Potri.009G073900 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
| Potri.011G063100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.5G322600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G063900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G005000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081040 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g032060 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc06g007230 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G42360.1) | 0.04 | Orthogroups_2024-Update | |
| Sopen01g051390 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen02g016820 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen11g001300 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00001128.32 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
| BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 137 | 180 |
| No external refs found! |