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  5. Pp1s215_10V6

Pp1s215_10V6


Description : cyclin-like f-box


Gene families : OG_42_0002133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s215_10V6
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G042200 No alias F-box family protein 0.03 Orthogroups_2024-Update
PSME_00003620-RA No alias (at2g32560 : 87.8) F-box family protein; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
PSME_00037666-RA No alias (at2g32560 : 228.0) F-box family protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.016G035900 No alias F-box family protein 0.02 Orthogroups_2024-Update
Seita.5G038400.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 79 121
No external refs found!