1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s215_20V6

Pp1s215_20V6


Description : programmed cell death protein 2


Gene families : OG_42_0003906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003906_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s215_20V6
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
At4g02220 No alias Putative zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q93VB4] 0.03 Orthogroups_2024-Update
GRMZM2G082573 No alias transcription regulators 0.02 Orthogroups_2024-Update
Kfl00115_0050 kfl00115_0050_v1.1 (at4g02220 : 173.0) zinc finger (MYND type) family... 0.03 Orthogroups_2024-Update
Mp3g10580.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Seita.9G435400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g076440 No alias Programmed cell death protein 2 (AHRD V3.3 *** A0A0B0NZT2_GOSAR) 0.03 Orthogroups_2024-Update
evm.model.tig00020961.63 No alias (at4g02220 : 83.2) zinc finger (MYND type) family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0045765 regulation of angiogenesis IEP Predicted GO
BP GO:0050793 regulation of developmental process IEP Predicted GO
BP GO:0051239 regulation of multicellular organismal process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901342 regulation of vasculature development IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:2000026 regulation of multicellular organismal development IEP Predicted GO
InterPro domains Description Start Stop
IPR007320 PDCD2_C 249 421
IPR002893 Znf_MYND 182 220
No external refs found!