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  5. Pp1s219_54V6

Pp1s219_54V6


Description : adenosine trna-specific 1


Gene families : OG_42_0004499 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004499_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s219_54V6
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cre14.g629283 No alias adenosine deaminases;RNA binding;RNA binding;adenosine deaminases 0.04 Orthogroups_2024-Update
Potri.014G081400 No alias adenosine deaminases;RNA binding;RNA binding;adenosine deaminases 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0004000 adenosine deaminase activity IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR002466 A_deamin 382 529
IPR002466 A_deamin 70 328
No external refs found!