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  5. Solyc11g040040

Solyc11g040040


Description : Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT3G19850.1)


Gene families : OG_42_0002382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g040040
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_33655 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
Bradi1g25320 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.11G104300 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Sopen11g017210 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 179 406
No external refs found!