1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s21_298V6

Pp1s21_298V6


Description : ras-related protein rab11a


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s21_298V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
232291 No alias RAB GTPase homolog A4C 0.03 Orthogroups_2024-Update
At1g01200 No alias RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7] 0.05 Orthogroups_2024-Update
At1g06400 No alias Ras-related protein RABA1a... 0.02 Orthogroups_2024-Update
At1g09630 No alias Ras-related protein RABA2a... 0.02 Orthogroups_2024-Update
Brara.B01117.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Cre03.g189250 No alias RAB GTPase 11C 0.01 Orthogroups_2024-Update
GRMZM2G124732 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
Glyma.03G259200 No alias RAB GTPase homolog A3 0.03 Orthogroups_2024-Update
Glyma.12G058900 No alias RAB GTPase homolog A2B 0.03 Orthogroups_2024-Update
Kfl00160_0170 kfl00160_0170_v1.1 (q39572|yptc6_chlre : 335.0) Ras-related protein YPTC6 -... 0.02 Orthogroups_2024-Update
LOC_Os05g20050 No alias ras-related protein, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00009105-RA No alias (at5g60860 : 357.0) RAB GTPase homolog A1F (RABA1f);... 0.02 Orthogroups_2024-Update
Sobic.001G031900.2 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Solyc01g096220 No alias Ras-related protein RABA3 (AHRD V3.3 *** A0A0B2Q7Y9_GLYSO) 0.03 Orthogroups_2024-Update
Solyc03g064020 No alias Ras-related protein RABA4d (AHRD V3.3 *** RAA4D_ARATH) 0.02 Orthogroups_2024-Update
Solyc11g010100 No alias Ras-related protein Rab11D (AHRD V3.3 *** RB11D_TOBAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!