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  5. Pp1s21_390V6

Pp1s21_390V6


Description : 60s ribosomal protein l28


Gene families : OG_42_0002199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s21_390V6
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
A4A49_23451 No alias 60s ribosomal protein l28-1 0.03 Orthogroups_2024-Update
A4A49_64591 No alias 60s ribosomal protein l28-1 0.03 Orthogroups_2024-Update
Brara.A00789.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I01133.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre11.g467578 No alias Ribosomal L28e protein family 0.01 Orthogroups_2024-Update
Glyma.07G012800 No alias Ribosomal L28e protein family 0.02 Orthogroups_2024-Update
Glyma.08G196500 No alias Ribosomal L28e protein family 0.03 Orthogroups_2024-Update
HORVU1Hr1G079370.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Kfl00166_0150 kfl00166_0150_v1.1 (at4g29410 : 108.0) Ribosomal L28e protein family;... 0.03 Orthogroups_2024-Update
Mp1g26940.1 No alias component RPL28 of LSU proteome component 0.02 Orthogroups_2024-Update
Pp1s505_8V6 No alias 60s ribosomal protein l28 0.04 Orthogroups_2024-Update
Seita.3G162800.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.5G288600.1 No alias component *(eL28) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
evm.model.contig_471.3 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00020710.93 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 8 127
No external refs found!