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  5. Pp1s220_60V6

Pp1s220_60V6


Description : amp dependent


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s220_60V6
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G042200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.11G014900 No alias acyl activating enzyme 1 0.02 Orthogroups_2024-Update
Solyc03g031940 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 64 498
IPR025110 AMP-bd_C 507 581
No external refs found!