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  5. Pp1s226_20V6

Pp1s226_20V6


Description : dna glycosylase


Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s226_20V6
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
At2g36490 No alias Protein ROS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJQ6] 0.03 Orthogroups_2024-Update
Bradi4g08870 No alias HhH-GPD base excision DNA repair family protein 0.05 Orthogroups_2024-Update
Glyma.03G190800 No alias HhH-GPD base excision DNA repair family protein 0.03 Orthogroups_2024-Update
Glyma.10G202150 No alias HhH-GPD base excision DNA repair family protein 0.02 Orthogroups_2024-Update
Kfl00179_0260 kfl00179_0260_v1.1 (at3g10010 : 280.0) Encodes a protein with DNA... 0.03 Orthogroups_2024-Update
LOC_Os05g37350 No alias hhH-GPD superfamily base excision DNA repair protein, expressed 0.02 Orthogroups_2024-Update
MA_111413g0010 No alias (at5g04560 : 155.0) Encodes a DNA glycosylase DEMETER... 0.02 Orthogroups_2024-Update
Mp1g05620.1 No alias methylcytosine-specific DNA glycosylase (ROS1) 0.04 Orthogroups_2024-Update
Sobic.004G149800.1 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.02 Orthogroups_2024-Update
Sobic.008G085300.1 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR028925 RRM_DME 1685 1712
No external refs found!