1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s22_52V6

Pp1s22_52V6


Description : F24B18.9; CONSTANS B-box zinc finger family protein [Arabidopsis thaliana]


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s22_52V6
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
49712 No alias B-box type zinc finger family protein 0.05 Orthogroups_2024-Update
A4A49_12129 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_19758 No alias b-box domain protein 30 0.05 Orthogroups_2024-Update
A4A49_22924 No alias b-box zinc finger protein 32 0.03 Orthogroups_2024-Update
A4A49_62883 No alias b-box domain protein 30 0.04 Orthogroups_2024-Update
At3g21890 No alias BBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7] 0.04 Orthogroups_2024-Update
Brara.A01701.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
Brara.C03818.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
Brara.J00918.1 No alias BBX class-V transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G085218 No alias B-box 32 0.04 Orthogroups_2024-Update
Glyma.08G221600 No alias B-box 32 0.02 Orthogroups_2024-Update
Glyma.12G196200 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.13G306300 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Kfl00104_0060 kfl00104_0060_v1.1 (at4g27310 : 80.5) B-box type zinc finger family... 0.01 Orthogroups_2024-Update
LOC_Os02g07930 No alias B-box zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g08120 No alias B-box zinc finger family protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g20050.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
Potri.010G251800 No alias B-box 32 0.04 Orthogroups_2024-Update
Potri.013G150500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.017G039400 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Seita.6G043200.1 No alias BBX class-V transcription factor 0.05 Orthogroups_2024-Update
Sobic.010G217532.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc06g063280 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g053140 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y7X2_CYNCS) 0.02 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.03 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.02 Orthogroups_2024-Update
Solyc12g005750 No alias LOW QUALITY:Zinc finger protein CONSTANS-LIKE 14 (AHRD... 0.03 Orthogroups_2024-Update
Sopen07g026690 No alias B-box zinc finger 0.03 Orthogroups_2024-Update
Sopen10g002670 No alias B-box zinc finger 0.04 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 46
No external refs found!