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  5. Pp1s236_72V6

Pp1s236_72V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s236_72V6
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_15237 No alias putative pectinesterase 67 0.02 Orthogroups_2024-Update
A4A49_29596 No alias putative pectinesterase 29 0.02 Orthogroups_2024-Update
A4A49_38924 No alias putative pectinesterase 53 0.02 Orthogroups_2024-Update
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.02 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.02 Orthogroups_2024-Update
Bradi1g21810 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Glyma.19G025500 No alias pectin methylesterase 31 0.02 Orthogroups_2024-Update
HORVU7Hr1G076580.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
MA_62865g0010 No alias (at2g36710 : 276.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00006227-RA No alias (at5g55590 : 348.0) Encodes a protein with pectin... 0.03 Orthogroups_2024-Update
Potri.006G186000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Sobic.003G231500.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 74 360
No external refs found!