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  5. Pp1s23_59V6

Pp1s23_59V6


Description : zinc finger a20 and an1 domains-containing protein


Gene families : OG_42_0000255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s23_59V6
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Bradi1g36050 No alias A20/AN1-like zinc finger family protein 0.04 Orthogroups_2024-Update
Brara.I05114.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.12G238400 No alias A20/AN1-like zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.19G193800 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
LOC_Os05g23470 No alias AN1-like zinc finger domain containing protein, expressed 0.01 Orthogroups_2024-Update
Potri.009G063900 No alias A20/AN1-like zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s23_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.5G297700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.010G155901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g061770 No alias A20/AN1 zinc finger protein 0.02 Orthogroups_2024-Update
Sopen12g034680 No alias AN1-like Zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002653 Znf_A20 17 40
IPR000058 Znf_AN1 113 150
No external refs found!