1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s240_84V6

Pp1s240_84V6


Description : ap2 erf domain-containing transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s240_84V6
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
A4A49_30015 No alias ethylene-responsive transcription factor erf019 0.02 Orthogroups_2024-Update
At1g33760 No alias Ethylene-responsive transcription factor ERF022... 0.02 Orthogroups_2024-Update
At1g43160 No alias Ethylene-responsive transcription factor RAP2-6... 0.02 Orthogroups_2024-Update
Brara.B03764.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.F02040.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Brara.F02347.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G175543 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.07G044300 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Glyma.07G156200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G194800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G118900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G233800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G020100 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
HORVU7Hr1G091560.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.005G219600 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Potri.010G072400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G032900 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.012G134000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.015G136400 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Potri.016G018600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s37_293V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.3G207800.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G171300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g016040 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 13 60
No external refs found!