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  5. Pp1s241_14V6

Pp1s241_14V6


Description : hypothetical protein similar to Arabidopsis thaliana chromosome 5, At5g25830 [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s241_14V6
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
405209 No alias GATA transcription factor 20 0.04 Orthogroups_2024-Update
A4A49_17145 No alias gata transcription factor 8 0.03 Orthogroups_2024-Update
At4g26150 No alias Putative GATA transcription factor 22... 0.03 Orthogroups_2024-Update
Bradi1g75420 No alias GATA transcription factor 11 0.02 Orthogroups_2024-Update
Bradi2g12590 No alias GATA transcription factor 23 0.02 Orthogroups_2024-Update
Brara.A00355.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.C03928.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.E00479.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.G01891.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.I04178.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.K00158.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.K00334.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Glyma.02G073900 No alias GATA transcription factor 4 0.02 Orthogroups_2024-Update
Glyma.08G142500 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.16G139400 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G005990.5 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
LOC_Os01g47360 No alias GATA zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10434815g0010 No alias (at2g45050 : 142.0) Encodes a member of the GATA factor... 0.03 Orthogroups_2024-Update
MA_44185g0010 No alias (at5g25830 : 135.0) Encodes a member of the GATA factor... 0.02 Orthogroups_2024-Update
PSME_00001982-RA No alias (at5g25830 : 153.0) Encodes a member of the GATA factor... 0.02 Orthogroups_2024-Update
Potri.T172039 No alias GATA transcription factor 12 0.02 Orthogroups_2024-Update
Seita.1G358400.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Seita.4G234800.1 No alias transcription factor *(A/B-GATA) 0.06 Orthogroups_2024-Update
Sobic.003G445800.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Sobic.006G162800.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Sobic.009G202000.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Solyc02g084590 No alias GATA transcription factor (AHRD V3.3 *** K4BAX4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc04g015360 No alias GATA transcription factor (AHRD V3.3 *** K4BQ39_SOLLC) 0.02 Orthogroups_2024-Update
Solyc05g056120 No alias GATA transcription factor (AHRD V3.3 *** K4C2T6_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000679 Znf_GATA 289 323
No external refs found!