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  5. Pp1s243_25V6

Pp1s243_25V6


Description : fiber protein fb2


Gene families : OG_42_0000601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s243_25V6
Cluster HCCA clusters: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Brara.C03173.1 No alias C2H2 subclass Di19 transcription factor 0.03 Orthogroups_2024-Update
PSME_00009261-RA No alias (at5g26990 : 98.2) Drought-responsive family protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008598 Di19_Zn_binding_dom 44 95
IPR027935 Di19_C 129 231
No external refs found!