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  5. Pp1s243_63V6

Pp1s243_63V6


Description : coatomer beta


Gene families : OG_42_0001146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s243_63V6
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
At1g79990 No alias Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:A0A178WGE9] 0.03 Orthogroups_2024-Update
Bradi1g51210 No alias Coatomer, beta\' subunit 0.08 Orthogroups_2024-Update
Bradi3g07926 No alias Coatomer, beta\' subunit 0.08 Orthogroups_2024-Update
Brara.A03091.1 No alias subunit beta2 of coat protein complex 0.02 Orthogroups_2024-Update
Brara.H00818.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.H00819.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00704.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre02.g118500 No alias Coatomer, beta\' subunit 0.04 Orthogroups_2024-Update
Glyma.15G013800 No alias Coatomer, beta\' subunit 0.02 Orthogroups_2024-Update
HORVU7Hr1G019930.1 No alias subunit beta2 of coat protein complex 0.03 Orthogroups_2024-Update
MA_10433989g0020 No alias (at1g52360 : 165.0) Coatomer, beta' subunit; FUNCTIONS... 0.02 Orthogroups_2024-Update
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.02 Orthogroups_2024-Update
Seita.1G040200.1 No alias subunit beta2 of coat protein complex 0.07 Orthogroups_2024-Update
Seita.4G032400.1 No alias subunit beta2 of coat protein complex 0.03 Orthogroups_2024-Update
Seita.4G227600.1 No alias subunit beta2 of coat protein complex 0.07 Orthogroups_2024-Update
Sobic.004G088450.1 No alias subunit beta2 of coat protein complex 0.03 Orthogroups_2024-Update
Sobic.004G088501.1 No alias subunit beta2 of coat protein complex 0.04 Orthogroups_2024-Update
Sobic.010G178600.1 No alias subunit beta2 of coat protein complex 0.05 Orthogroups_2024-Update
Solyc03g120260 No alias Coatomer beta subunit, putative (AHRD V3.3 *-* B9SQC0_RICCO) 0.02 Orthogroups_2024-Update
Solyc03g120270 No alias Coatomer beta subunit, putative (AHRD V3.3 *** B9SQC0_RICCO) 0.02 Orthogroups_2024-Update
Solyc06g066730 No alias Coatomer beta subunit, putative (AHRD V3.3 *** B9SQC0_RICCO) 0.06 Orthogroups_2024-Update
evm.model.contig_4516.1 No alias (at1g79990 : 963.0) structural molecules; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
evm.model.tig00020903.33 No alias (at1g79990 : 1008.0) structural molecules; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 319 763
IPR001680 WD40_repeat 134 171
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 220 256
IPR001680 WD40_repeat 59 85
IPR001680 WD40_repeat 177 215
No external refs found!