1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g045350

Solyc11g045350


Description : Plant regulator RWP-RK family protein (AHRD V3.3 *** AT2G43500.9)


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g045350
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Brara.I01314.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
Glyma.20G160200 No alias NIN like protein 7 0.03 Orthogroups_2024-Update
Pp1s250_18V6 No alias T19F6.10; RWP-RK domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
BP GO:0006808 regulation of nitrogen utilization IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR000270 PB1_dom 886 967
IPR003035 RWP-RK_dom 599 646
No external refs found!