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  5. Pp1s251_59V6

Pp1s251_59V6


Description : beta-expansin 3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s251_59V6
Cluster HCCA clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
171427 No alias expansin B3 0.04 Orthogroups_2024-Update
A4A49_20975 No alias putative expansin-b2 0.04 Orthogroups_2024-Update
At1g65680 No alias Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6] 0.04 Orthogroups_2024-Update
At2g20750 No alias Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2] 0.02 Orthogroups_2024-Update
At3g60570 No alias Expansin-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M203] 0.02 Orthogroups_2024-Update
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.03 Orthogroups_2024-Update
Bradi1g78340 No alias expansin B2 0.03 Orthogroups_2024-Update
Bradi1g78350 No alias expansin B2 0.02 Orthogroups_2024-Update
Bradi3g33130 No alias expansin B2 0.02 Orthogroups_2024-Update
Brara.A01798.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
Brara.E00482.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00483.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G00015.1 No alias beta-class expansin 0.03 Orthogroups_2024-Update
Brara.K00035.1 No alias beta-class expansin 0.04 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G121308 No alias expansin B4 0.02 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.05 Orthogroups_2024-Update
HORVU3Hr1G073140.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G105170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G092910.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g01270 No alias expansin precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g46650 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427897g0010 No alias (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
MA_166764g0010 No alias (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
MA_78155g0010 No alias (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00005304-RA No alias (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.06 Orthogroups_2024-Update
PSME_00009595-RA No alias (q7x6j9|exb17_orysa : 96.7) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00010298-RA No alias (at2g20750 : 169.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00015392-RA No alias (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00020732-RA No alias (q7x6j9|exb17_orysa : 285.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00024925-RA No alias (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00025248-RA No alias (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00041021-RA No alias (at4g28250 : 171.0) putative beta-expansin/allergen... 0.02 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.05 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.06 Orthogroups_2024-Update
Pp1s313_59V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Seita.1G260700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G122700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G122800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G177400.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
Seita.9G326900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G300700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G301000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G294500.1 No alias PNP precursor polypeptide 0.02 Orthogroups_2024-Update
Sopen03g024200 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 74 153
IPR007117 Expansin_CBD 167 251
No external refs found!