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  5. Solyc11g045530

Solyc11g045530


Description : LOB domain-containing protein, putative (AHRD V3.3 *** B9RI26_RICCO)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g045530
Cluster HCCA clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
58936 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
A4A49_32358 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
At2g40470 No alias LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
Brara.G01383.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
GRMZM2G145568 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
Glyma.02G234600 No alias LOB domain-containing protein 13 0.04 Orthogroups_2024-Update
Glyma.10G213500 No alias LOB domain-containing protein 1 0.05 Orthogroups_2024-Update
Glyma.11G164800 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.04 Orthogroups_2024-Update
Glyma.15G228100 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.04 Orthogroups_2024-Update
HORVU3Hr1G088440.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G084750.2 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Kfl00147_0060 kfl00147_0060_v1.1 (at1g65620 : 174.0) Required for formation of a... 0.02 Orthogroups_2024-Update
LOC_Os01g07480 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g19950 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16891g0010 No alias (at5g63090 : 175.0) Involved in lateral organ... 0.02 Orthogroups_2024-Update
MA_16891g0020 No alias (at5g63090 : 162.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
Mp8g09250.1 No alias transcription factor (AS2/LOB) 0.03 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.05 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.04 Orthogroups_2024-Update
PSME_00022409-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00043015-RA No alias (at2g28500 : 127.0) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.04 Orthogroups_2024-Update
PSME_00048913-RA No alias (at2g28500 : 129.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.05 Orthogroups_2024-Update
Potri.012G133700 No alias LOB domain-containing protein 24 0.03 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.02 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen12g034780 No alias Protein of unknown function DUF260 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 13 110
No external refs found!