1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s256_72V6

Pp1s256_72V6


Description : T24C20.20; senescence-associated protein, putative [Arabidopsis thaliana]


Gene families : OG_42_0001298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001298_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s256_72V6
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Potri.008G179401 No alias B12D protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0032299 ribonuclease H2 complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR010530 B12D 12 80
No external refs found!