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  5. Pp1s258_34V6

Pp1s258_34V6


Description : Pectinesterase-2 precursor (Pectin methylesterase) (PE) [Citrus sinensis]


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s258_34V6
Cluster HCCA clusters: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
A4A49_30247 No alias putative pectinesterasepectinesterase inhibitor 28 0.02 Orthogroups_2024-Update
A4A49_32529 No alias putative pectinesterasepectinesterase inhibitor 28 0.02 Orthogroups_2024-Update
A4A49_34937 No alias pectinesterasepectinesterase inhibitor 18 0.02 Orthogroups_2024-Update
At1g23200 No alias Probable pectinesterase/pectinesterase inhibitor 6... 0.02 Orthogroups_2024-Update
At4g02320 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V0A5] 0.03 Orthogroups_2024-Update
At5g49180 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178UKT8] 0.02 Orthogroups_2024-Update
Brara.C02457.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.F02072.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G232100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
Mp8g00060.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00003000-RA No alias (at1g53830 : 495.0) encodes a pectin methylesterase;... 0.05 Orthogroups_2024-Update
PSME_00012293-RA No alias (o04887|pme2_citsi : 426.0) Pectinesterase-2 precursor... 0.04 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Potri.001G162400 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.015G013700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Seita.5G344400.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc03g123630 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 282 583
IPR006501 Pectinesterase_inhib_dom 68 211
No external refs found!