1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s25_268V6

Pp1s25_268V6


Description : F4P9.34; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s25_268V6
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
Kfl00025_0480 kfl00025_0480_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_2788g0010 No alias (at2g33570 : 543.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
MA_630451g0010 No alias (at2g33570 : 546.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
Mp1g18380.1 No alias beta-1,4-galactosyltransferase 0.04 Orthogroups_2024-Update
PSME_00054805-RA No alias (at2g33570 : 533.0) Domain of unknown function (DUF23);... 0.02 Orthogroups_2024-Update
Pp1s198_141V6 No alias F4P9.34; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s556_1V6 No alias F4P9.34; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 230 466
No external refs found!