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  5. Pp1s262_89V6

Pp1s262_89V6


Description : T5M7.5; chloroplast nucleoid DNA-binding protein-related [Arabidopsis thaliana]


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s262_89V6
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
A4A49_04158 No alias aspartic proteinase-like protein 2 0.02 Orthogroups_2024-Update
At3g20015 No alias Protein ASPARTIC PROTEASE IN GUARD CELL 2... 0.02 Orthogroups_2024-Update
Brara.J02279.1 No alias A1-class (Pepsin) protease 0.02 Orthogroups_2024-Update
Glyma.19G188600 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
LOC_Os04g58070 No alias aspartic proteinase nepenthesin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10180837g0010 No alias (at2g03200 : 270.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_10293g0010 No alias (at3g25700 : 411.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_255440g0010 No alias (at2g03200 : 205.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_85737g0010 No alias (at2g03200 : 301.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Mp3g22800.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
PSME_00007040-RA No alias (at3g25700 : 261.0) Eukaryotic aspartyl protease family... 0.01 Orthogroups_2024-Update
PSME_00026773-RA No alias (at2g03200 : 309.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Solyc08g068860 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g068870 No alias aspartate protease family protein 0.02 Orthogroups_2024-Update
Sopen03g036610 No alias Xylanase inhibitor N-terminal 0.02 Orthogroups_2024-Update
Sopen10g005190 No alias Xylanase inhibitor N-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 395 546
IPR032861 TAXi_N 200 371
No external refs found!