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  5. Pp1s266_66V6

Pp1s266_66V6


Description : alpha expansin xpa5


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s266_66V6
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
174522 No alias expansin A8 0.03 Orthogroups_2024-Update
179212 No alias expansin A15 0.03 Orthogroups_2024-Update
419575 No alias expansin A16 0.03 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.02 Orthogroups_2024-Update
A4A49_33199 No alias expansin-a15 0.02 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.02 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.03 Orthogroups_2024-Update
At1g26770 No alias Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] 0.02 Orthogroups_2024-Update
At3g15370 No alias Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2] 0.03 Orthogroups_2024-Update
At5g05290 No alias Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866] 0.02 Orthogroups_2024-Update
Bradi1g61190 No alias expansin A15 0.02 Orthogroups_2024-Update
Bradi2g10320 No alias expansin A14 0.02 Orthogroups_2024-Update
Bradi3g09950 No alias expansin 11 0.03 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.03 Orthogroups_2024-Update
Brara.B03352.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.G02887.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Glyma.06G021700 No alias expansin 11 0.02 Orthogroups_2024-Update
Glyma.06G195000 No alias expansin A15 0.02 Orthogroups_2024-Update
Glyma.15G037700 No alias expansin A4 0.03 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.02 Orthogroups_2024-Update
LOC_Os01g14650 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g60770 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g16780 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g16850 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10232070g0010 No alias (at2g40610 : 411.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
MA_40314g0010 No alias (q40636|expa2_orysa : 396.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
MA_474624g0010 No alias (q40636|expa2_orysa : 403.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
Mp3g10160.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Mp4g06560.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.001G240900 No alias expansin A4 0.03 Orthogroups_2024-Update
Potri.002G184700 No alias expansin A17 0.02 Orthogroups_2024-Update
Potri.005G244100 No alias expansin 11 0.05 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.003G338801.1 No alias alpha-class expansin 0.05 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Sobic.009G173700.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Solyc06g049050 No alias expansin 2 0.02 Orthogroups_2024-Update
Solyc08g080060 No alias Expansin-like protein (AHRD V3.3 *** Q0WT83_ARATH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 72 152
IPR007117 Expansin_CBD 164 242
No external refs found!