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  5. Pp1s269_36V6

Pp1s269_36V6


Description : myb-cc type transfactor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s269_36V6
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Bradi1g63530 No alias Homeodomain-like superfamily protein 0.01 Orthogroups_2024-Update
Brara.H02156.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G017300 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g20900 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G130200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc04g050070 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g022470 No alias Myb family transcription factor family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 55 105
IPR025756 Myb_CC_LHEQLE 139 185
No external refs found!