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No description available
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s26_188V6 | |
| Cluster | HCCA clusters: Cluster_214 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 115259 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 51483 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g14470 | No alias | Pentatricopeptide repeat-containing protein At1g14470... | 0.02 | Orthogroups_2024-Update | |
| At2g36730 | No alias | Pentatricopeptide repeat-containing protein At2g36730... | 0.03 | Orthogroups_2024-Update | |
| At3g16610 | No alias | Pentatricopeptide repeat-containing protein At3g16610... | 0.04 | Orthogroups_2024-Update | |
| At4g15720 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | Orthogroups_2024-Update | |
| At5g66520 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | Orthogroups_2024-Update | |
| Bradi3g03440 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G096602 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G163359 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G011700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G227300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G286100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G026400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G015630.5 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G015970.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G074220.1 | No alias | RNA editing factor *(MEF21) | 0.05 | Orthogroups_2024-Update | |
| HORVU1Hr1G093220.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G012210.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| HORVU2Hr1G107430.1 | No alias | RNA editing factor *(MEF10) | 0.02 | Orthogroups_2024-Update | |
| HORVU4Hr1G029060.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g07050 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g42610 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_122546g0010 | No alias | (at3g13770 : 499.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| MA_205762g0010 | No alias | (at4g02750 : 416.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_767209g0010 | No alias | (at3g49170 : 650.0) embryo defective 2261 (EMB2261);... | 0.02 | Orthogroups_2024-Update | |
| MA_81105g0010 | No alias | (at2g22070 : 600.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00018595-RA | No alias | (at1g11290 : 678.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00024868-RA | No alias | (at1g11290 : 684.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00038145-RA | No alias | (at5g52630 : 598.0) Encodes a member of the DYW... | 0.03 | Orthogroups_2024-Update | |
| PSME_00052756-RA | No alias | (at3g09040 : 614.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056351-RA | No alias | (at2g03880 : 544.0) Pentatricopeptide repeat (PPR)... | 0.04 | Orthogroups_2024-Update | |
| Sobic.005G008400.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G147400.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sopen03g033730 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
| Sopen11g024580 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
| BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
| BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 171 | 198 |
| No external refs found! |