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  5. Pp1s272_37V6

Pp1s272_37V6


Description : hypothetical protein similar to Arabidopsis thaliana chromosome 2, At2g26180 [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0000276 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s272_37V6
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_22261 No alias protein iq-domain 1 0.04 Orthogroups_2024-Update
Bradi2g05840 No alias IQ-domain 6 0.02 Orthogroups_2024-Update
Glyma.06G232400 No alias IQ-domain 10 0.02 Orthogroups_2024-Update
MA_79409g0010 No alias (at3g22190 : 230.0) IQ-domain 5 (IQD5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00045808-RA No alias (at4g00820 : 159.0) IQ-domain 17 (iqd17); CONTAINS... 0.03 Orthogroups_2024-Update
Solyc09g007410 No alias SUN-like protein 25 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 96 115
No external refs found!