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Pp1s284_11V6


Description : ubiquitin fusion protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s284_11V6
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At4g05050 No alias Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0] 0.02 Orthogroups_2024-Update
Glyma.13G176100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
evm.model.contig_510.13 No alias (at1g31340 : 120.0) Encodes a ubiquitin-related protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001975 Ribosomal_L40e 78 127
IPR000626 Ubiquitin_dom 3 74
No external refs found!