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  5. Pp1s285_12V6

Pp1s285_12V6


Description : peroxisome biogenesis


Gene families : OG_42_0006739 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s285_12V6
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G058410.6 No alias component *(Pex1) of Pex1-Pex6 subcomplex 0.03 Orthogroups_2024-Update
Kfl00001_0640 kfl00001_0640_v1.1 (at5g08470 : 373.0) an AAA-ATPase that is the probable... 0.02 Orthogroups_2024-Update
LOC_Os08g44240 No alias AAA-type ATPase family protein, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.007G172400.1 No alias component *(Pex1) of Pex1-Pex6 subcomplex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005777 peroxisome IEA InterProScan predictions
BP GO:0007031 peroxisome organization IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 618 757
IPR003959 ATPase_AAA_core 912 1038
IPR015342 PEX-N_psi_beta-barrel 96 169
No external refs found!