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  5. Pp1s286_43V6

Pp1s286_43V6


Description : zinc ion binding


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s286_43V6
Cluster HCCA clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
Cre16.g668550 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 Orthogroups_2024-Update
PSME_00003775-RA No alias (at1g29800 : 250.0) RING/FYVE/PHD-type zinc finger... 0.05 Orthogroups_2024-Update
PSME_00049046-RA No alias (at3g43230 : 296.0) RING/FYVE/PHD-type zinc finger... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 275 340
IPR007461 Ysc84_actin-binding 457 582
IPR018957 Znf_C3HC4_RING-type 32 74
No external refs found!