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  5. Pp1s28_15V6

Pp1s28_15V6


Description : 60S ribosomal protein L15-1 [Picea mariana]


Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s28_15V6
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
270259 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
A4A49_58101 No alias 60s ribosomal protein l15-1 0.04 Orthogroups_2024-Update
At4g16720 No alias Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1] 0.02 Orthogroups_2024-Update
Bradi1g27332 No alias Ribosomal protein L23/L15e family protein 0.02 Orthogroups_2024-Update
Bradi3g23072 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
Brara.A01864.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C04524.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.C04547.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.H00875.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.H00923.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Cre02.g091100 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
Glyma.01G207700 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
Glyma.05G061400 No alias Ribosomal protein L23/L15e family protein 0.07 Orthogroups_2024-Update
Glyma.11G034700 No alias Ribosomal protein L23/L15e family protein 0.06 Orthogroups_2024-Update
Glyma.17G143200 No alias Ribosomal protein L23/L15e family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G052650.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU5Hr1G048830.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
LOC_Os05g19370 No alias 60S ribosomal protein L15, putative, expressed 0.02 Orthogroups_2024-Update
MA_19619g0010 No alias (o82528|rl15_pethy : 332.0) 60S ribosomal protein L15 -... 0.06 Orthogroups_2024-Update
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.07 Orthogroups_2024-Update
PSME_00006746-RA No alias (o82528|rl15_pethy : 315.0) 60S ribosomal protein L15 -... 0.03 Orthogroups_2024-Update
Potri.003G078700 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
Pp1s68_114V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.04 Orthogroups_2024-Update
Pp1s7_364V6 No alias FCAALL.416; 60S ribosomal protein L15 (RPL15A)... 0.04 Orthogroups_2024-Update
Seita.2G046800.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.2G317300.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G047600.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.002G304900.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Solyc04g008460 No alias SET-domain containing protein lysine methyltransferase... 0.08 Orthogroups_2024-Update
Solyc06g060400 No alias Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC) 0.07 Orthogroups_2024-Update
Solyc06g064630 No alias Ribosomal protein L15 (AHRD V3.3 *** K4C793_SOLLC) 0.05 Orthogroups_2024-Update
Sopen04g003610 No alias Ribosomal L15 0.04 Orthogroups_2024-Update
Sopen06g020540 No alias Ribosomal L15 0.05 Orthogroups_2024-Update
Sopen06g023110 No alias Ribosomal L15 0.07 Orthogroups_2024-Update
evm.model.contig_2025.57 No alias (at4g16720 : 267.0) Ribosomal protein L23/L15e family... 0.06 Orthogroups_2024-Update
evm.model.tig00000310.75 No alias (at4g16720 : 256.0) Ribosomal protein L23/L15e family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!