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  5. Pp1s28_306V6

Pp1s28_306V6


Description : 60s ribosomal protein l31a


Gene families : OG_42_0001913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s28_306V6
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
268515 No alias Ribosomal protein L31e family protein 0.07 Orthogroups_2024-Update
A4A49_04515 No alias 60s ribosomal protein l31 0.02 Orthogroups_2024-Update
Bradi3g39870 No alias Ribosomal protein L31e family protein 0.07 Orthogroups_2024-Update
Bradi3g53460 No alias Ribosomal protein L31e family protein 0.06 Orthogroups_2024-Update
Brara.B01256.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C01233.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.I04723.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.J01097.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre12.g489153 No alias Ribosomal protein L31e family protein 0.09 Orthogroups_2024-Update
Glyma.01G004300 No alias Ribosomal protein L31e family protein 0.07 Orthogroups_2024-Update
Glyma.05G223800 No alias Ribosomal protein L31e family protein 0.02 Orthogroups_2024-Update
Glyma.07G127500 No alias Ribosomal protein L31e family protein 0.1 Orthogroups_2024-Update
Glyma.08G030900 No alias Ribosomal protein L31e family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G070670.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
MA_14317g0010 No alias (q9mav7|rl31_pangi : 197.0) 60S ribosomal protein L31 -... 0.04 Orthogroups_2024-Update
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.09 Orthogroups_2024-Update
PSME_00053840-RA No alias (q9mav7|rl31_pangi : 196.0) 60S ribosomal protein L31 -... 0.02 Orthogroups_2024-Update
Potri.001G269600 No alias Ribosomal protein L31e family protein 0.04 Orthogroups_2024-Update
Potri.009G064100 No alias Ribosomal protein L31e family protein 0.04 Orthogroups_2024-Update
Pp1s30_365V6 No alias 60s ribosomal protein l31a 0.17 Orthogroups_2024-Update
Pp1s50_89V6 No alias 60s ribosomal protein l31a 0.12 Orthogroups_2024-Update
Seita.1G297300.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Seita.6G204000.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.004G259700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.007G211700.1 No alias component *(eL31) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc12g008720 No alias 60S ribosomal protein L31 (AHRD V3.3 *** W9QLF2_9ROSA) 0.1 Orthogroups_2024-Update
Sopen05g003860 No alias Ribosomal protein L31e 0.03 Orthogroups_2024-Update
Sopen12g003650 No alias Ribosomal protein L31e 0.12 Orthogroups_2024-Update
evm.model.contig_477.12 No alias (q9mav7|rl31_pangi : 120.0) 60S ribosomal protein L31 -... 0.06 Orthogroups_2024-Update
evm.model.tig00020703.20 No alias (q9mav7|rl31_pangi : 155.0) 60S ribosomal protein L31 -... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 11 92
No external refs found!