Pp1s28_54V6

Description : af402605_1homeodomain leucine zipper protein hdz2

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s28_54V6
Cluster	HCCA clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
At4g36740	No alias	homeobox protein 40 [Source:TAIR;Acc:AT4G36740]	0.04	Orthogroups_2024-Update
Bradi1g73190	No alias	Homeobox-leucine zipper protein family	0.02	Orthogroups_2024-Update
Bradi3g35850	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Bradi3g38600	No alias	homeobox protein 5	0.05	Orthogroups_2024-Update
Brara.B04002.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02402.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I03165.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os10g26500	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
MA_238039g0010	No alias	(at1g69780 : 142.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
MA_3951g0010	No alias	(at1g69780 : 143.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Pp1s65_52V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.04	Orthogroups_2024-Update
Sobic.002G272900.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g010600	No alias	Homeobox-leucine zipper protein family (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc02g062960	No alias	Homeobox-leucine zipper family protein (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc05g006980	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	106	159
IPR003106	Leu_zip_homeo	161	200

External Links

No external refs found!

Pp1s28_54V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation