1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s293_34V6

Pp1s293_34V6


Description : chromodomain helicase dna binding protein 1-like


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s293_34V6
Cluster HCCA clusters: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
A4A49_27543 No alias putative atp-dependent dna helicase chr12 0.03 Orthogroups_2024-Update
A4A49_34289 No alias iswi chromatin-remodeling complex atpase chr11 0.03 Orthogroups_2024-Update
HORVU3Hr1G012850.1 No alias ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.03 Orthogroups_2024-Update
evm.model.tig00020960.24 No alias (at2g13370 : 202.0) chromatin remodeling 5 (CHR5);... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 398 520
IPR000330 SNF2_N 93 377
No external refs found!