1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s293_5V6

Pp1s293_5V6


Description : kinesin-13a atp binding microtubule motor


Gene families : OG_42_0001402 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001402_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s293_5V6
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_04145 No alias kinesin-13a 0.03 Orthogroups_2024-Update
Bradi2g35167 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.07G086500 No alias ATP binding microtubule motor family protein 0.03 Orthogroups_2024-Update
Glyma.13G358700 No alias ATP binding microtubule motor family protein 0.02 Orthogroups_2024-Update
Potri.008G226200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Pp1s21_208V6 No alias kinesin-13a atp binding microtubule motor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0007018 microtubule-based movement IEA InterProScan predictions
MF GO:0008017 microtubule binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 99 418
No external refs found!