Solyc11g064990

Description : SolycHsfB4b

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g064990
Cluster	HCCA clusters: Cluster_308

Target	Alias	Description	ECC score	Gene Family Method
A4A49_30961	No alias	heat stress transcription factor a-6b	0.03	Orthogroups_2024-Update
Brara.B02421.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H00433.1	No alias	HSF-type transcription factor	0.01	Orthogroups_2024-Update
GRMZM2G115456	No alias	heat shock factor 3	0.02	Orthogroups_2024-Update
Glyma.01G185800	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.02	Orthogroups_2024-Update
HORVU4Hr1G073650.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G068320.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os01g54550	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g36930	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g44690	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g28354	No alias	CPuORF39 - conserved peptide uORF-containing transcript,...	0.02	Orthogroups_2024-Update
LOC_Os10g28340	No alias	heat stress transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00034738-RA	No alias	(at1g46264 : 131.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
PSME_00053758-RA	No alias	(at5g62020 : 205.0) member of Heat Stress Transcription...	0.03	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G224200.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G225300.1	No alias	HSF-type transcription factor	0.05	Orthogroups_2024-Update
Solyc04g016000	No alias	SolycHsfB3a	0.04	Orthogroups_2024-Update
Solyc09g082670	No alias	SolycHsfA6a	0.03	Orthogroups_2024-Update
Sopen03g004850	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update
Sopen04g032370	No alias	HSF-type DNA-binding	0.05	Orthogroups_2024-Update
Sopen08g018510	No alias	HSF-type DNA-binding	0.04	Orthogroups_2024-Update
Sopen09g031520	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Predicted GO
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0016168	chlorophyll binding	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predicted GO
MF	GO:0019825	oxygen binding	IEP	Predicted GO
MF	GO:0030570	pectate lyase activity	IEP	Predicted GO
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	Predicted GO
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
MF	GO:0047325	inositol tetrakisphosphate 1-kinase activity	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO
MF	GO:0051765	inositol tetrakisphosphate kinase activity	IEP	Predicted GO
MF	GO:0051766	inositol trisphosphate kinase activity	IEP	Predicted GO
MF	GO:0052725	inositol-1,3,4-trisphosphate 6-kinase activity	IEP	Predicted GO
MF	GO:0052726	inositol-1,3,4-trisphosphate 5-kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	24	113

External Links

No external refs found!

Solyc11g064990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation